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Mr. M's Microscopy of the Reef, FlowerMama's Dinos! #303


Mr. Microscope

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Mr. Microscope

Man, this is one of the coolest threads I've seen on NR in a while.

Thanks rb! Oops, looks like you posted this back in September. Sorry I missed it.

 

It's written by Pechenik.

called "Biology of the Invertebrates" by Jan A. Pechenik. I have the 6th edition.

Woohoo! I'll go check this out pronto! Thanks Newman!

Oh what I wouldn't give to learn on a SEM or TEM.... Knew I should've gone to the big state school. Lol science may not pay much, but if its interesting that makes up for it right?

Yes, science is interesting, but there's a reason why scientists are leaving the field in droves and going into things like finance, medicine, or real estate. Honestly, it's really tough raising a family on scientist money unless you worked for industry or pharma. But, then it's all about how many widgets you can pump out and not about the research. On the plus side, I just found out a paper I co-authored was accepted into Nature! That could mean good things for me down the road.

that's awesome! thanks for sharing :)

Thanks shinynic! Hopefully, I can post more in the future.

Bad ass, you do any tem also? I just did some cyro microtome and tem, man that was stressful.

Thanks Jstn. Yes, I do TEM as well. Did you mean cryo-ultramicrotomy? Yes, I'm skilled in that as well. I agree that it's really tough to learn. I've been at it for years and it's rather routine for me now, but the learning curve it extreme.

I have certain tricks to maintain a steady hand while working under oculars: don't drink coffee the morning you're going to do it, eat a banana, make sure you're not hungry (even blood sugar), and I breath out all my air when I need a moment of extreme still; I try not to breath back in until the maneuver is done. It also helps if you have a micro-manipulator to hold your grid for you. Also, instead of using an eyelash tool, I make my tools out of a white Dalmatian hair (I've recently discovered that white Beagle hair works as well). Finally, it really helps if you're ambidextrous while working under a microscope.

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Mr. Microscope

Micro, do you want to know the exact page number from that book for the electron micrograph of the bristleworm larva?

I'm going to see if my university library has a copy.
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Mr. Microscope

May I use this as my desktop background?

Why would you want to use that when I can send you the full resolution version!? :) PM sent. ;)

AWESOME PICTURES!~!!!!!

Thanks Suds!
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  • 3 months later...
Mr. Microscope

Full res versions would be awesome. I was using the diatom pic as my phone wallpaper for a while. B)

Hey Chew Magna! Sorry for the late responds. I'm honored that you chose to use the diatom pic. It's one of my favorites too. Let me know if you want a full res pic of something. I'll send it to you.

Absolutely fascinating thread! Love it!

Keep it coming :)

 

Thanks TJ!

Awesome microscopy pics!!! I love them.

 

I too play around with a microscope & love photography and always wanted to blend the two.

 

Here are some of my macro past tank shots (just click on Exotic Fish).

http://www.pbase.com/fastuno/root

Thanks fastuno! They can be a blast. I think it's awesome to peer into a little hidden corner of the world that no one else has ever seen. It always feels like a victory to me.

 

Nice macros! I love that angel shot and the nem of course. Well done!

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Mr. Microscope

Hello All,

 

There's no microscopy here, but I recently took a tour of the sea urchin facility that we have here in the university. I may have some related microscopy images to share in the future however as we are studying the sea urchin eggs.

 

There is another identical set-up to this on the opposite wall:

IMG_2447_zpsd0849e01.jpg

 

Check out the return pump on this setup. The thing is like a foot long and like four or five inches in diameter:

IMG_2442_zps9547abb7.jpg

lol salt creep

 

Urchins! The facility gets different urchins depending on the season. Right now, they have these purple ones. Other times, they get a smaller white variety:

IMG_2455_zps7deb56a1.jpg

 

IMG_2446_zps8c99e34a.jpg

 

These are temperate/cold water urchins. So the water is kept around 57F.

IMG_2444_zpsf8341668.jpg

 

They told me that this chiller wasn't quite enough, so they got a second one:

IMG_2445_zpsd68054d2.jpg

 

Skimmer!

IMG_2441_zps176adf97.jpg

 

Sump with some biological filtration in it:

IMG_2449_zpsa6c6edb3.jpg

 

Here's the barrel they use for making salt water:

IMG_2458_zpse06f09d0.jpg

You can see the test kit on it that they use for testing nitrate and phosphate. Of course, I tried selling them on a Hanna checker and something like Red Sea or Salifert for Nitrate. They are also using a hydrometer to check salinity. So, I told them about a refractometer.

 

With the urchins, they get a shipment of kelp that they use to feed the urchins.

IMG_2448_zpsa1ac08cc.jpg

 

Check it out. I found a couple dried up isopods in the kelp:

IMG_2451_zpsf136c40d.jpg

 

Here's my colleague feeding the urchins. She let me feed them as well.

IMG_2450_zpse92f828f.jpg

 

Stay tuned! More science to come!

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Man my ocd is going nuts looking at the lack of maintenance in there. I'd be on people's ass every day til that was cleaned up. That much salt spray on those chillers is no good, saltwater is highly corrosive. They'll be replacing those years before they should.

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  • 4 weeks later...
Mr. Microscope

Hello All,

 

I've recently discovered that I have dinos. I'm certainly taking steps to eliminate them from my system, but I figured this would also be a good opportunity to do some interesting microscopy. I'm planning to check them out by TEM and SEM.

 

 

From left to right, algae/slime taken from system today, dino prep for SEM (with algae), dino pellet prep for TEM.

Dinomicroscopy_zps708b43f0.jpg

 

Here's a close-up of the pellet:

DinoTEMtube_zpsde8f3ae7.jpg

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Ostreopsis. sp.. Treat them with respect they make palytoxin. If you kill a lot of them fast that could be a dangerous amount of toxin released. I'll try to send you that SEM protocol tonight. Its the protocol by Faust so you might be able to look it up too.

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  • 1 month later...

Cool urchin room, Stronglyocentrotus purpuratus I believe. I don't work much with temperate species anymore, but it is always impressive all the work put into marine systems for universities (I often forget this because our lab has running seawater).

Being a bit of an echinoderm fan myself, I'm curious how your Echinometra is doing?

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id give anything to see those dinos interacting in a mix of peroxide in live video like that, if you ever get bored :) interesting to see if death mechanism is apoptosis or bleaching etc, interested in cell wall integrity details during/post treatment for sure pm me if you ever do this!!!!!!!!!!!!!

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jedimasterben

id give anything to see those dinos interacting in a mix of peroxide in live video like that, if you ever get bored :) interesting to see if death mechanism is apoptosis or bleaching etc, interested in cell wall integrity details during/post treatment for sure pm me if you ever do this!!!!!!!!!!!!!

There is no point in using peroxide on them. A 10ppt salinity change bursts their cell wall almost on contact.

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that sounds like an open and shut case of invader beating

 

based on that simplicity, all dino invasions across species should be eradicated in a single treatment, within the week then. a problem ranging back to the dawn of reefing...

 

 

if it doesnt go down like that, for whatever reason (someone not wanting a salnity shock perhaps even though I do this to my tank for other reasons without harm) and people are posting dino threads next month like they have for 62+ mos then Ima be wondering about cell wall integrity heh

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jedimasterben

that sounds like the first open and shut case of invader beating Ive ever seen :)

 

based on that simplicity, all dino invasions across species should be eradicated in a single treatment, within the week then. a problem ranging back to the dawn of reefing...

 

 

if it doesnt go down like that, for whatever reason (someone not wanting a salnity shock perhaps even though I do this to my tank for other reasons without harm) and people are posting dino threads next month like they have for 62+ mos then Ima be wondering about cell wall integrity heh

Dinoflagellates encyst if conditions become unfavorable (some species encyst simply as part of their life cycle). It's not known if they are protected in this cyst, but they can be 'resurrected' after hundreds of years of encystment.

 

Pre-15ppt dip:

IMG_6266.jpg

 

IMG_6252.jpg

 

 

One hour post-15ppt dip:

IMG_6288.jpg

 

 

17 days post-15ppt dip:

IMG_6633.jpg

 

 

20 days post-15ppt dip:

IMG_6647.jpg

 

IMG_6651.jpg

 

IMG_6670.jpg

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